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Details about package breseq

Name:	breseq
Uploader:	Gürkan Myczko <gurkan@phys.ethz.ch> (Debian QA page)
Description:	breseq - Find mutations relative to reference sequences

Package uploads

Upload #1

Information

Version:	0.35.3-1
Uploaded:	2020-10-01 11:22
Source package:	breseq_0.35.3-1.dsc
Distribution:	unstable
Section:	science
Priority:	optional
Homepage:	http://barricklab.org/breseq
Closes bugs:	#942845

Changelog

 breseq (0.35.3-1) unstable; urgency=medium
 .
   * Initial release. (Closes: #942845)

QA information

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Package uses debhelper

Debhelper compatibility level 11

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Package is the latest upstream version

local:	0.35.3
upstream:	0.35.3
url:	https://github.com/barricklab/breseq/archive/v0.35.3.tar.gz

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Package is not native

format: 3.0 (quilt)
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"Maintainer" email is the same as the uploader
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Package has lintian warnings
breseq
- W embedded-javascript-library
  - usr/share/doc/breseq/_static/doctools.js please use sphinx
  - usr/share/doc/breseq/_static/jquery-1.11.1.js please use libjs-jquery
  - usr/share/doc/breseq/_static/jquery.js please use libjs-jquery
  - usr/share/doc/breseq/_static/searchtools.js please use sphinx
  - usr/share/doc/breseq/_static/underscore.js please use libjs-underscore
- W privacy-breach-generic
  - usr/share/doc/breseq/installation.html [<img alt="https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat" src="https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat" />] (https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)
- I possible-documentation-but-no-doc-base-registration
- I spelling-error-in-binary
  - usr/bin/breseq accomodates accommodates
  - usr/bin/breseq positon position
  - usr/bin/breseq unamed unnamed
  - usr/bin/breseq withing within
  - usr/bin/gdtools accomodates accommodates
  - usr/bin/gdtools accross across
  - usr/bin/gdtools beween between
  - usr/bin/gdtools formating formatting
  - usr/bin/gdtools occuring occurring
  - usr/bin/gdtools positon position
  - usr/bin/gdtools signficant significant
  - usr/bin/gdtools therefor therefore
  - usr/bin/gdtools unamed unnamed
  - usr/bin/gdtools withing within
breseq source
- X debian-rules-uses-as-needed-linker-flag
  - line 11
- X debian-watch-does-not-check-gpg-signature
- X upstream-metadata-file-is-missing
- P maintainer-manual-page
  - debian/breseq.1
  - debian/gdtools.1
- P package-does-not-install-examples
  - extern/samtools-1.3.1/examples/
- P package-uses-old-debhelper-compat-version
  - 11
- P silent-on-rules-requiring-root
- P source-contains-prebuilt-javascript-object
  - documentation/_static/jquery.js line length is 32086 characters (>512)
  - documentation/_static/underscore.js line length is 519 characters (>512)
- P source-contains-prebuilt-sphinx-documentation
  - documentation/
- P spelling-in-override-comment
  - source-is-missing (line 1) exectuable executable
- P uses-debhelper-compat-file
- P very-long-line-length-in-source-file
  - documentation/_static/jquery.js line length is 32086 characters (>512)
  - documentation/_static/underscore.js line length is 519 characters (>512)
- O source-is-missing
  - documentation/_static/jquery.js line length is 32086 characters (>512) (override comment: Partly included in the exectuable binary with qt resource links. Upstream distributes it like this, repacking would be overkill though, so <strike>tell lintian to not complain:</strike> tell lintian to just fuck the shut up:)
  - documentation/_static/underscore.js line length is 519 characters (>512) (override comment: Partly included in the exectuable binary with qt resource links. Upstream distributes it like this, repacking would be overkill though, so <strike>tell lintian to not complain:</strike> tell lintian to just fuck the shut up:)
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Package closes ITP bug
- breseq:
  - #942845 (Wishlist, ITP): ITP: breseq -- Find mutations relative to reference sequences
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No VCS field present
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Package is not in Debian
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Upstream-Contact missing from d/copyright

author: None

licenses: GPL-3+, MIT, BSD-2-clause

Comments

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author:	None
licenses:	GPL-3+, MIT, BSD-2-clause